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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30896733_30905704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

30896733 - 30905704

Intron Length:

8972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

ATATCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATTTCTTTATAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

75.3

0.57

66.1

44.5

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

66.4

0.59

1.7

83.63

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008254

30896620 - 30949153

52534