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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30926534_30929536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30926534 - 30929536

Intron Length:

3003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TCTTCCTTTTCT

Flanking Amino Acid:

DRFLQWKWLERQPVTKNTFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.85

0.7

80.3

31.8

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

-0

3.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021554

30925781 - 30949153

23373

ENSAPLT00000008254

30896620 - 30949153

52534