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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30929601_30930145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30929601 - 30930145

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTAATTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTCTTTAATT

Flanking Amino Acid:

RVLGKGGFGEVCACQVRATG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.68

0.8

77.3

35.6

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

83.8

1.14

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021554

30925781 - 30949153

23373

ENSAPLT00000008254

30896620 - 30949153

52534