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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30935948_30936766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30935948 - 30936766

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTCCAG

Flanking Amino Acid:

KPENILLDDYGHIRISDLGL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

92.7

0.96

0.6

85.4

29.3

Minor 5ss

38.9

-1.2

50.6

40.1

Minor BPS

43.2

-0.6

3.7

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021554

30925781 - 30949153

23373

ENSAPLT00000008254

30896620 - 30949153

52534