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Intron Name: Anas_platyrhynchos_platyrhynchos_6_30936857_30938121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30936857 - 30938121

Intron Length:

1265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTCTCCTCCACA

Flanking Amino Acid:

RGRVGTVGYMAPEVLNNQRY

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

81.3

0.71

0.7

76.1

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

60.7

0.33

75.44

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021554

30925781 - 30949153

23373

ENSAPLT00000008254

30896620 - 30949153

52534