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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3105060_3106837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3105060 - 3106837

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

ATGTAGTTAATC

Flanking Amino Acid:

KELENRQKMYRWKEWHPGFP

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

85.2

0.79

0.8

83.9

31.1

Minor 5ss

33.8

-1.8

45.5

42.6

Minor BPS

50.5

-0

2.2

65.49

40.5

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045782

3095139 - 3125391

30253

ENSAPLT00000003461

3095139 - 3131302

36164