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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3106961_3108950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3106961 - 3108950

Intron Length:

1990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTATTCAGGACT

Flanking Amino Acid:

GIDFVLNYSKAMENLYINRF

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.5

40.5

Major BPS

76.3

0.65

67.3

39.3

Major PPT

0.74

0.8

81.2

36.5

Minor 5ss

38.2

-1.3

3.3

48.1

41.4

Minor BPS

53.9

0.2

1.8

77.52

38.4

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045782

3095139 - 3125391

30253

ENSAPLT00000003461

3095139 - 3131302

36164