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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3109058_3112206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3109058 - 3112206

Intron Length:

3149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTTTA

5'SS Class:

major

3'SS Sequence:

CATTTTCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGATACTGAAGC

Flanking Amino Acid:

IFVRISNTISEYVMQHWKED

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

72.8

34.4

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

80.1

0.68

0.7

78.2

30.2

Minor 5ss

37.1

-1.5

3.2

45.3

45.2

Minor BPS

49.2

-0

1.9

62.45

42.1

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003461

3095139 - 3131302

36164

ENSAPLT00000045782

3095139 - 3125391

30253