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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3112380_3113125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3112380 - 3113125

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TGTTAAAACACA

Flanking Amino Acid:

RNLTLEEEVKQGNIFIVDYE

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

37.3

-1

2.4

55.45

42.7

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045782

3095139 - 3125391

30253

ENSAPLT00000003461

3095139 - 3131302

36164