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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3113273_3113369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3113273 - 3113369

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGTTG

5'SS Class:

major

3'SS Sequence:

TCATGTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTCTTTTCATG

Flanking Amino Acid:

ENKIVPIAIQLGQKPGPENP

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

66.5

41.6

Major BPS

100

1.24

0.5

100

Major PPT

78.5

0.64

0.9

69.4

41.5

Minor 5ss

33.5

-1.9

3.6

45.4

49.7

Minor BPS

49.1

-0.2

1.7

58.14

38.3

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045782

3095139 - 3125391

30253

ENSAPLT00000003461

3095139 - 3131302

36164