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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31134278_31134562_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31134278 - 31134562

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTCTGTCTAACA

Flanking Amino Acid:

RYNPRPRLDKSENETVSCFR

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

75.3

0.57

0.8

69.4

31.3

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

53.7

0.11

2.1

71.45

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022267

31131370 - 31135388

4019