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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3113574_3113790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3113574 - 3113790

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTCT

5'SS Class:

major

3'SS Sequence:

TCCCATTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCTTTCATT

Flanking Amino Acid:

QLPAVHPLFKLLVPHMRFTI

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.5

38.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.2

0.7

0.8

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

67.1

0.62

1.7

82.98

39.3

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045782

3095139 - 3125391

30253

ENSAPLT00000003461

3095139 - 3131302

36164