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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3113878_3114268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3113878 - 3114268

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TCTATGTTCATG

Flanking Amino Acid:

LICECGLFDKANATGGGGHV

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

84.8

0.86

85.7

34.9

Major PPT

83.7

0.76

0.8

78.1

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

42.4

-0.7

2.4

50.63

44.5

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045782

3095139 - 3125391

30253

ENSAPLT00000003461

3095139 - 3131302

36164