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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31141854_31142580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31141854 - 31142580

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTC

5'SS Class:

major

3'SS Sequence:

AATTGGATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTAAAGA

Flanking Amino Acid:

VVRNPEEDGKDTLQCIAEML

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

76.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.1

0.43

1.1

63.5

46.3

Minor 5ss

47.2

-0.3

2.4

61.9

42.9

Minor BPS

57.7

0.24

1.9

73.92

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032000

31140618 - 31142672

2055