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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3114448_3118258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3114448 - 3118258

Intron Length:

3811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTATCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCCTCTATC

Flanking Amino Acid:

DGIKVWEAIKSFAEDVIHIY

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

74.8

0.56

0.8

69.1

30.2

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

58.4

0.25

1.9

71.93

39.2

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045782

3095139 - 3125391

30253

ENSAPLT00000003461

3095139 - 3131302

36164