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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3120770_3127612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3120770 - 3127612

Intron Length:

6843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGCTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TGTCAAATAAAA

Flanking Amino Acid:

AQHAAVNFGQPAAQEIQTGC

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

0.3

62.3

30.4

Major PPT

79.2

0.66

0.9

72.1

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

43.6

-0.4

59.18

38.9

Associated Gene:

Gene:

ALOX5

Ensembl Gene ID:

ENSAPLG00000003338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003461

3095139 - 3131302

36164