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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31253_32417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31253 - 32417

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTACGTATT

5'SS Class:

major

3'SS Sequence:

CTCTTCTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTAAATT

Flanking Amino Acid:

RYSDQMAYGISSEKMLKAWK

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.9

0.56

79.1

Minor 5ss

-0.8

3.1

64.2

40.3

Minor BPS

69.6

0.69

1.6

86.64

33.8

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790