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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31295215_31298918_F

Intron Information:

Intron Rank:

133121

Intron Class:

major

Intron Phase:

Intron Coordinates:

31295215 - 31298918

Intron Length:

3704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCAGTTTA

5'SS Class:

major

3'SS Sequence:

GTGACTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCTTCTGTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.3

77.8

33.2

Major BPS

0.22

1.2

52.4

43.3

Major PPT

0.36

58.2

Minor 5ss

40.9

-1

2.8

50.4

40.2

Minor BPS

55.2

0.25

2.1

74.14

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019681

31275633 - 31299616

23984

ENSAPLT00000042758

31221130 - 31299616

78487

ENSAPLT00000024663

31225566 - 31299616

74051

ENSAPLT00000020285

31216976 - 31299616

82641