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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31329922_31336194_F

Intron Information:

Intron Rank:

132855

Intron Class:

major

Intron Phase:

Intron Coordinates:

31329922 - 31336194

Intron Length:

6273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCCTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GGAAGCATAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

70.3

40.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

81.8

0.72

0.8

80.4

31.6

Minor 5ss

38.3

-1.3

2.8

51.5

Minor BPS

47.1

-0.1

2.1

64.81

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038770

31329736 - 31342555

12820