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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31355958_31376049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31355958 - 31376049

Intron Length:

20092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TGTTATTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

AAATTGTTATTT

Flanking Amino Acid:

GIRILLFGVFVFTEFLDPFQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

70.4

35.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.2

0.84

0.8

84.8

35.4

Minor 5ss

32.6

-2

2.7

37.5

40.1

Minor BPS

46.4

-0.2

2.2

63.77

40.9

Associated Gene:

Gene:

PLPP4

Ensembl Gene ID:

ENSAPLG00000011003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011454

31355902 - 31413583

57682