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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31376159_31381395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31376159 - 31381395

Intron Length:

5237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTATCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TATTTGTTATCT

Flanking Amino Acid:

SDNIPTRLMFAISFLTPLAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

86.1

0.81

0.8

80.6

31.3

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

55.6

0.25

2.3

80.51

41.4

Associated Gene:

Gene:

PLPP4

Ensembl Gene ID:

ENSAPLG00000011003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011454

31355902 - 31413583

57682