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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3151881_3153935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3151881 - 3153935

Intron Length:

2055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTCTTCCTACAG

Flanking Amino Acid:

PWNLAESLKELSKKYGPVFT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

0.52

1.1

77.7

35.3

Major PPT

89.6

0.89

0.6

84.5

23.5

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

46.1

-0.4

2.1

56.57

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003161

3137232 - 3160356

23125