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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31576085_31576624_F

Intron Information:

Intron Rank:

149374

Intron Class:

major

Intron Phase:

Intron Coordinates:

31576085 - 31576624

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTCCCT

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTAAGACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

59.3

45.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.72

0.8

77.2

31.5

Minor 5ss

39.5

-1.2

3.3

58.1

Minor BPS

41.8

-0.5

2.1

68.23

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046078

31573181 - 31576762

3582