Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_31635879_31642895_R

Intron Information:

Intron Rank:

134280

Intron Class:

major

Intron Phase:

Intron Coordinates:

31635879 - 31642895

Intron Length:

7017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

AATTCATCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

GCTGCTGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

65.2

40.8

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

65.4

0.35

0.9

56.3

39.3

Minor 5ss

29.1

-2.4

3.1

35.7

41.3

Minor BPS

49.2

0.02

2.1

67.55

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045561

31632537 - 31643154

10618