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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3168567_3169080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3168567 - 3169080

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

SRNLKDLNQKYAALQPYLEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

BLOC1S2

Ensembl Gene ID:

ENSAPLG00000002893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042806

3167864 - 3173937

6074

ENSAPLT00000002938

3167864 - 3170871

3008