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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3169201_3170090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3169201 - 3170090

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGAACATTAAAA

Flanking Amino Acid:

MATYLTGELTATSEDYKLLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

75.5

0.57

1.1

79.2

38.4

Minor 5ss

-2.2

3.3

45.6

Minor BPS

54.3

0.13

1.8

65.22

39.8

Associated Gene:

Gene:

BLOC1S2

Ensembl Gene ID:

ENSAPLG00000002893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002938

3167864 - 3170871

3008