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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3172401_3172885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3172401 - 3172885

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATATAATAAACT

Flanking Amino Acid:

GSCPSVTSGEMCSGEAYLCS

Intron Amino Acid Position:

786

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

0.72

78.4

31.2

Major PPT

85.3

0.8

80.6

31.4

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

49.6

0.05

2.1

73.93

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030185

3172253 - 3188700

16448

ENSAPLT00000021621

3172253 - 3188700

16448

ENSAPLT00000002570

3172253 - 3188700

16448