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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3173790_3174210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3173790 - 3174210

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TGTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

GTGTTTGTGACT

Flanking Amino Acid:

LITICFVLMLIFSGLLVNLP

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

81.8

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

87.5

0.84

0.7

85.1

29.7

Minor 5ss

41.9

-0.9

2.8

57.3

41.2

Minor BPS

49.6

0.05

70.47

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030185

3172253 - 3188700

16448

ENSAPLT00000021621

3172253 - 3188700

16448

ENSAPLT00000002570

3172253 - 3188700

16448