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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3174846_3176663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3174846 - 3176663

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

AAACCTGTAAAA

Flanking Amino Acid:

VKLDQSGIQNRHQYTSGYYR

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

70.1

43.1

Major BPS

0.57

73.6

28.6

Major PPT

74.9

0.56

0.8

32.2

Minor 5ss

40.1

-1.1

2.8

50.1

46.1

Minor BPS

45.8

-0.3

54.87

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021621

3172253 - 3188700

16448