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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31803768_31805007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31803768 - 31805007

Intron Length:

1240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCAAATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTAATTTTACTT

Flanking Amino Acid:

NIDYYKKTTNGRLPVKWMAP

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

74.4

36.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

64.6

0.33

1.1

42.1

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

55.6

0.25

1.6

72.54

39.1

Associated Gene:

Gene:

FGFR2

Ensembl Gene ID:

ENSAPLG00000011952

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012558

31796968 - 31877200

80233

ENSAPLT00000036505

31796968 - 31877200

80233

ENSAPLT00000027497

31796968 - 31877200

80233

ENSAPLT00000025382

31796883 - 31872691

75809