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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3181748_3183413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3181748 - 3183413

Intron Length:

1666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGCTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CAGCTGTCAATT

Flanking Amino Acid:

FKCISGYVVQDDVVMGTMTV

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

73.9

0.54

69.5

41.7

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

42.2

-0.5

2.1

53.96

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021621

3172253 - 3188700

16448

ENSAPLT00000002570

3172253 - 3188700

16448