Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_31822081_31825886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31822081 - 31825886

Intron Length:

3806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAATG

5'SS Class:

major

3'SS Sequence:

ACCTGCGATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

CCCTCCCGAAAA

Flanking Amino Acid:

AWLSVLPSIQAPEKEKEYPT

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

75.5

40.6

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

61.1

0.25

50.6

42.5

Minor 5ss

42.6

-0.8

57.6

46.6

Minor BPS

-0.3

1.9

54.03

44.1

Associated Gene:

Gene:

FGFR2

Ensembl Gene ID:

ENSAPLG00000011952

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036505

31796968 - 31877200

80233

ENSAPLT00000027497

31796968 - 31877200

80233

ENSAPLT00000025382

31796883 - 31872691

75809