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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3185773_3188304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3185773 - 3188304

Intron Length:

2532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

TTTGTCTCAGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

TCTTCCCTGAGT

Flanking Amino Acid:

PPPGAPGGPEMGTAQNNSSP

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

74.4

0.55

0.9

71.5

34.3

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

58.6

0.35

79.95

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030185

3172253 - 3188700

16448

ENSAPLT00000021621

3172253 - 3188700

16448

ENSAPLT00000002570

3172253 - 3188700

16448