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Intron Name: Anas_platyrhynchos_platyrhynchos_6_31948323_31952174_R

Intron Information:

Intron Rank:

141730

Intron Class:

major

Intron Phase:

Intron Coordinates:

31948323 - 31952174

Intron Length:

3852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

GGCCTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTGAATAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

71.2

0.48

0.9

65.4

36.1

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

49.5

-0

2.2

72.53

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045985

31944907 - 31952474

7568

ENSAPLT00000044895

31947399 - 31952474

5076

ENSAPLT00000027826

31944907 - 31963348

18442