Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32039669_32041193_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32039669 - 32041193

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGGCT

5'SS Class:

major

3'SS Sequence:

ACTTCTTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATGTGTTTAACT

Flanking Amino Acid:

LPDDAPHKLEVRVVRSSPPS

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.4

37.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

71.4

0.48

32.2

Minor 5ss

31.9

-2.1

3.6

48.1

47.5

Minor BPS

67.6

0.63

1.8

81.85

40.1

Associated Gene:

Gene:

ATE1

Ensembl Gene ID:

ENSAPLG00000012854

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042394

31967349 - 32052293

84945

ENSAPLT00000019697

31967349 - 32052293

84945