Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32155327 - 32162103

Intron Length:

6777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GTGTTTAAAATT

Flanking Amino Acid:

IKPQLSLEDTGLSSETAPVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

82.2

0.72

0.8

76.9

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

46.7

-0.1

1.8

64.42

40.9

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000047897

32079948 - 32194665

114718

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000042454

32084039 - 32195359

111321

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32155327_32162103_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: