Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32167760 - 32168753

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AGAGCATTAATC

Flanking Amino Acid:

RSPLSDPPSQDPTPLPTPET

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

0.88

0.7

29.8

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

52.7

0.07

1.7

59.85

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000047897

32079948 - 32194665

114718

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000042454

32084039 - 32195359

111321

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32167760_32168753_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: