Gene Search

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32168962 - 32172555

Intron Length:

3594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATGTATTTAATG

Flanking Amino Acid:

NETKFSSPTEELEYGNSYEI

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.4

41.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

82.4

0.73

0.9

Minor 5ss

0.64

2.2

73.3

43.5

Minor BPS

60.6

0.19

1.5

62.36

40.1

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000047897

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000042454

32084039 - 32195359

111321

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32168962_32172555_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: