Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32172618 - 32173471

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TTCCTGTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

AATTGGTTAATG

Flanking Amino Acid:

YMEKIGSSVPQDDSTPKKQS

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.8

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

74.4

0.55

68.4

42.1

Minor 5ss

45.8

-0.4

2.8

69.7

40.4

Minor BPS

47.7

-0.3

2.4

58.61

43.5

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

ENSAPLT00000047897

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000042454

32084039 - 32195359

111321

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32172618_32173471_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: