Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32174512 - 32175691

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTACCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TCCTTCTTACCC

Flanking Amino Acid:

LGTTPEAIEITSPEDSFVSA

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

82.5

29.6

Major BPS

0.82

0.8

83.9

25.3

Major PPT

79.8

0.67

0.8

70.4

Minor 5ss

39.3

-1.2

2.9

Minor BPS

63.2

0.39

1.7

69.02

43.1

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000047897

32079948 - 32194665

114718

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000042454

32084039 - 32195359

111321

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32174512_32175691_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: