Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32181765 - 32182851

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGGAT

U12 Branch Point Sequence:

GCTTTGTTTAAG

Flanking Amino Acid:

DSALRLARAEIVAKEREVSE

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

80.7

34.7

Major BPS

54.8

0.12

1.4

55.1

42.1

Major PPT

70.9

0.47

1.1

74.8

39.1

Minor 5ss

-0.9

2.9

59.3

45.1

Minor BPS

42.1

-0.7

2.4

48.42

44.8

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000042454

32084039 - 32195359

111321

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000047897

32079948 - 32194665

114718

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32181765_32182851_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: