Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32187141 - 32192595

Intron Length:

5455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TTCCTTCTAACA

Flanking Amino Acid:

EYEKTIAQMIEDEQREKSVS

Intron Amino Acid Position:

853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

80.4

0.68

0.8

76.9

30.4

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

56.2

0.19

1.7

68.77

37.7

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

ENSAPLT00000047897

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000042454

32084039 - 32195359

111321

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32187141_32192595_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: