Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32192757 - 32193301

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCATTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTAAATTTAACG

Flanking Amino Acid:

MKEVLEGFRKNEEVLKKCAQ

Intron Amino Acid Position:

907

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

77.5

32.9

Major BPS

100

1.24

0.5

100

Major PPT

73.5

0.53

1.1

76.9

36.3

Minor 5ss

29.1

-2.4

2.8

34.7

41.7

Minor BPS

61.3

0.22

1.6

66.23

41.1

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000047897

32079948 - 32194665

114718

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000042454

32084039 - 32195359

111321

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32192757_32193301_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: