Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32193409 - 32194265

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATCTAT

U12 Branch Point Sequence:

GTGACAAAAATC

Flanking Amino Acid:

LKIHAEEKLDRANAEIAQVR

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

28.2

Major BPS

57.2

0.18

1.2

56.5

40.3

Major PPT

81.1

0.7

0.8

73.8

41.4

Minor 5ss

34.4

-1.8

3.3

49.3

46.9

Minor BPS

40.9

-0.7

50.11

40.2

Associated Gene:

Gene:

TACC2

Ensembl Gene ID:

ENSAPLG00000013559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014159

32140890 - 32195510

54621

ENSAPLT00000037356

32085035 - 32195359

110325

ENSAPLT00000042454

32084039 - 32195359

111321

ENSAPLT00000026221

32084039 - 32194665

110627

ENSAPLT00000039561

32084039 - 32194665

110627

ENSAPLT00000023959

32084039 - 32195359

111321

ENSAPLT00000038168

32079948 - 32194665

114718

ENSAPLT00000020629

32084039 - 32194665

110627

ENSAPLT00000037756

32084039 - 32194665

110627

ENSAPLT00000047897

32079948 - 32194665

114718

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32193409_32194265_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: