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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32249361_32251273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32249361 - 32251273

Intron Length:

1913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TGATTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCAGCTTCACCT

Flanking Amino Acid:

SLVWYMDNPQNLPSGSPPVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

79.7

0.67

77.1

41.8

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

47.4

-0.1

1.9

64.32

46.3

Associated Gene:

Gene:

PLEKHA1

Ensembl Gene ID:

ENSAPLG00000013754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033661

32237428 - 32263029

25602

ENSAPLT00000027582

32237428 - 32265647

28220

ENSAPLT00000014379

32237428 - 32265647

28220