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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32251331_32252944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32251331 - 32252944

Intron Length:

1614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ACGATGTTAATT

Flanking Amino Acid:

GVIKLTYISKVSDATKLRPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

84.4

0.85

34.5

Major PPT

78.1

0.63

0.8

70.8

35.4

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

47.8

-0

61.91

42.9

Associated Gene:

Gene:

PLEKHA1

Ensembl Gene ID:

ENSAPLG00000013754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033661

32237428 - 32263029

25602

ENSAPLT00000027582

32237428 - 32265647

28220

ENSAPLT00000014379

32237428 - 32265647

28220