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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32261563_32262718_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32261563 - 32262718

Intron Length:

1156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTATGTTAC

5'SS Class:

weak_major

3'SS Sequence:

CACTGTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GTTACTCTAATC

Flanking Amino Acid:

QRGPGRSAASMRQARRLSNP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.3

62.3

39.1

Major BPS

82.2

0.8

0.9

81.6

Major PPT

70.8

0.47

60.8

44.4

Minor 5ss

48.4

-0.1

2.4

65.2

39.7

Minor BPS

57.2

0.21

1.7

68.66

36.7

Associated Gene:

Gene:

PLEKHA1

Ensembl Gene ID:

ENSAPLG00000013754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033661

32237428 - 32263029

25602

ENSAPLT00000014379

32237428 - 32265647

28220