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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32262760_32265023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32262760 - 32265023

Intron Length:

2264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATACATC

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

AGGGACTTAATT

Flanking Amino Acid:

ARRLSNPCIQRSIPSLLPNP

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

71.2

38.9

Major BPS

78.2

0.7

77.9

32.1

Major PPT

91.2

0.93

0.6

84.1

30.8

Minor 5ss

49.4

-0

2.6

68.8

42.2

Minor BPS

56.3

0.28

1.6

68.03

42.9

Associated Gene:

Gene:

PLEKHA1

Ensembl Gene ID:

ENSAPLG00000013754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014379

32237428 - 32265647

28220