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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32407596_32408718_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32407596 - 32408718

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGC|GCAGGTACA

5'SS Class:

weak_major

3'SS Sequence:

AATGAGTGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

TGTCCCTGAGAC

Flanking Amino Acid:

QPKEDASVICGALKSFTTGD

Intron Amino Acid Position:

955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.01

65.2

40.3

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

55.9

0.13

1.1

50.8

46.9

Minor 5ss

25.2

-2.8

3.8

29.2

35.9

Minor BPS

49.2

-0

1.8

63.75

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045481

32360349 - 32408781

48433