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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32425532_32426231_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
32425532 - 32426231

Intron Length:
700

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGAGGG

5'SS Class:
strong_major

3'SS Sequence:
TCTCTCTACACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAA

U12 Branch Point Sequence:
TTTCTCTCTACA

Flanking Amino Acid:
KRGLRAADHSGTLTKTDAEE

Intron Amino Acid Position:
433

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.3
0.9
0.9
69.9
41.1

Major BPS
78
0.7
0.9
79.6
29.1

Major PPT
77
0.61
0.8
72.3
31.3

Minor 5ss
29.8
-2.3
3.3
38.5
46.6

Minor BPS
55.3
0.16
1.9
73.04
38.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32420323 - 32426404
6082